Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MKS1Q9NXB0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 KRT8P39-201ENST00000396270 1433 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 KRT17P6-201ENST00000453795 1220 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 MINOS1P3-201ENST00000457048 203 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 AL590326.2-201ENST00000625139 305 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 AC126177.1-201ENST00000547829 2218 ntBASIC16.65■□□□□ 0.26
MKS1Q9NXB0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
MKS1Q9NXB0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.64■□□□□ 0.26
MKS1Q9NXB0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 IGHV3-47-201ENST00000425060 335 ntBASIC16.64■□□□□ 0.25
MKS1Q9NXB0 POU5F1P6-201ENST00000466990 990 ntBASIC16.64■□□□□ 0.25
MKS1Q9NXB0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 TPSP2-201ENST00000561760 610 ntBASIC16.64■□□□□ 0.25
MKS1Q9NXB0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.64■□□□□ 0.25
MKS1Q9NXB0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.64■□□□□ 0.25
MKS1Q9NXB0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms