Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SLC52A1Q9NWF4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 OSM-203ENST00000403463 464 ntTSL 3 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 AC093724.1-201ENST00000448659 1027 ntBASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 AC055876.2-201ENST00000531834 546 ntBASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 AC061975.2-201ENST00000581722 295 ntBASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 SRD5A3P1-201ENST00000603021 949 ntBASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 AC099568.2-201ENST00000609194 695 ntBASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 MIR6799-201ENST00000620297 69 ntBASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SLC52A1Q9NWF4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 AC024267.1-201ENST00000582320 895 ntBASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 AL033527.5-202ENST00000641632 1098 ntBASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC52A1Q9NWF4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 RHBDF1P1-201ENST00000427504 1941 ntBASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 MIR1909-201ENST00000411312 80 ntBASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 RPS2P32-201ENST00000439199 892 ntBASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 MIR6805-201ENST00000615055 62 ntBASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 AL139011.1-202ENST00000642063 584 ntBASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SLC52A1Q9NWF4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC23.78■■□□□ 1.4
SLC52A1Q9NWF4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms