Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 AL353593.2-201ENST00000602529 1483 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 INTS4P1-201ENST00000438455 1935 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 KLF4P1-201ENST00000412782 1185 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TSPY19P-201ENST00000418461 509 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TSPY18P-201ENST00000441642 509 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 AC091304.2-201ENST00000564639 760 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 AC092171.3-201ENST00000610122 2651 ntBASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LIN7CQ9NUP9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 AC026691.1-201ENST00000602502 2017 ntBASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 RCN1P2-201ENST00000398357 915 ntBASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 KRT18P31-201ENST00000506277 1292 ntBASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIN7CQ9NUP9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms