Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 AC007967.3-201ENST00000434308 558 ntBASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 ABCD1P5-201ENST00000445663 754 ntBASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 SCARNA2-201ENST00000458748 420 ntBASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 AC106795.1-205ENST00000512851 1056 ntBASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 MTDHP3-201ENST00000594186 672 ntBASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 AL355877.3-201ENST00000622820 899 ntBASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.3■□□□□ 0.2
TIMMDC1Q9NPL8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 FAM197Y8-203ENST00000450145 560 ntBASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AF186996.4-201ENST00000467186 377 ntBASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TIMMDC1Q9NPL8 AC092384.3-202ENST00000564646 2873 ntBASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 AP001269.4-201ENST00000609611 512 ntBASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMMDC1Q9NPL8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms