Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 AL353779.1-201ENST00000434793 351 ntBASIC18.31■□□□□ 0.52
HIPK3Q9H422 MTND6P24-201ENST00000440466 518 ntBASIC18.31■□□□□ 0.52
HIPK3Q9H422 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 API5-211ENST00000534695 560 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 AC009113.1-201ENST00000570267 2443 ntBASIC18.31■□□□□ 0.52
HIPK3Q9H422 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 AC133963.1-201ENST00000504166 1679 ntBASIC18.31■□□□□ 0.52
HIPK3Q9H422 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 FZD10-202ENST00000539839 3282 ntBASIC18.3■□□□□ 0.52
HIPK3Q9H422 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 PRYP6-201ENST00000514804 343 ntBASIC18.3■□□□□ 0.52
HIPK3Q9H422 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 AL589739.1-201ENST00000607720 493 ntBASIC18.3■□□□□ 0.52
HIPK3Q9H422 AL844908.2-201ENST00000609461 460 ntBASIC18.3■□□□□ 0.52
HIPK3Q9H422 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIPK3Q9H422 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIPK3Q9H422 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 FOXO1B-201ENST00000504678 1527 ntBASIC18.29■□□□□ 0.52
HIPK3Q9H422 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 NOC2LP1-202ENST00000452600 2235 ntBASIC18.29■□□□□ 0.52
HIPK3Q9H422 AC098614.1-201ENST00000368528 745 ntBASIC18.29■□□□□ 0.52
HIPK3Q9H422 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
HIPK3Q9H422 KRT8P49-201ENST00000604166 1432 ntBASIC18.29■□□□□ 0.52
HIPK3Q9H422 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIPK3Q9H422 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms