Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CIPCQ9C0C6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.23■□□□□ 0.35
CIPCQ9C0C6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CIPCQ9C0C6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.23■□□□□ 0.35
CIPCQ9C0C6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CIPCQ9C0C6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CIPCQ9C0C6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.22■□□□□ 0.35
CIPCQ9C0C6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AL121761.2-201ENST00000598007 1648 ntBASIC17.22■□□□□ 0.35
CIPCQ9C0C6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AC026120.1-201ENST00000611536 926 ntBASIC17.22■□□□□ 0.35
CIPCQ9C0C6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.22■□□□□ 0.35
CIPCQ9C0C6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CIPCQ9C0C6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.21■□□□□ 0.35
CIPCQ9C0C6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 SPDYE11-202ENST00000450699 704 ntBASIC17.21■□□□□ 0.35
CIPCQ9C0C6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 SPDYE9P-201ENST00000570642 692 ntBASIC17.21■□□□□ 0.35
CIPCQ9C0C6 SPDYE10P-202ENST00000612005 668 ntBASIC17.21■□□□□ 0.35
CIPCQ9C0C6 SPDYE8P-202ENST00000612377 668 ntBASIC17.21■□□□□ 0.35
CIPCQ9C0C6 AC106028.4-201ENST00000614509 607 ntBASIC17.21■□□□□ 0.35
CIPCQ9C0C6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CIPCQ9C0C6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CIPCQ9C0C6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CIPCQ9C0C6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CIPCQ9C0C6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CIPCQ9C0C6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.2■□□□□ 0.34
CIPCQ9C0C6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms