Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 AC243591.1-201ENST00000452967 1364 ntBASIC15.56■□□□□ 0.08
TRIM2Q9C040 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM2Q9C040 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM2Q9C040 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.55■□□□□ 0.08
TRIM2Q9C040 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 SCARNA2-201ENST00000458748 420 ntBASIC15.55■□□□□ 0.08
TRIM2Q9C040 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 AC139887.3-201ENST00000568585 713 ntBASIC15.55■□□□□ 0.08
TRIM2Q9C040 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 AL139424.1-201ENST00000607572 797 ntBASIC15.55■□□□□ 0.08
TRIM2Q9C040 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.55■□□□□ 0.08
TRIM2Q9C040 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM2Q9C040 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM2Q9C040 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 KRT8P49-201ENST00000604166 1432 ntBASIC15.54■□□□□ 0.08
TRIM2Q9C040 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 AL391256.1-201ENST00000443260 1855 ntBASIC15.54■□□□□ 0.08
TRIM2Q9C040 AC011270.2-201ENST00000624293 2550 ntBASIC15.54■□□□□ 0.08
TRIM2Q9C040 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM2Q9C040 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM2Q9C040 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms