Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 AC138969.3-201ENST00000546612 1459 ntBASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 AC138932.2-201ENST00000548268 1459 ntBASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 AC126755.4-201ENST00000549796 1459 ntBASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH11XQ9BZA7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 SNX33P1-201ENST00000592116 1762 ntBASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 AC134043.2-201ENST00000624206 2238 ntBASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDH11XQ9BZA7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 ARSEP1-201ENST00000420443 635 ntBASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 DFFBP1-201ENST00000433250 979 ntBASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PCDH11XQ9BZA7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 AC098614.1-201ENST00000368528 745 ntBASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ATP5G2P4-201ENST00000442175 420 ntBASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 RN7SL618P-201ENST00000477850 296 ntBASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 AC010336.2-201ENST00000564226 506 ntBASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 AC004790.1-201ENST00000612686 536 ntBASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 KRT8P39-201ENST00000396270 1433 ntBASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDH11XQ9BZA7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 AL512361.1-201ENST00000554200 418 ntBASIC21.59■■□□□ 1.05
PCDH11XQ9BZA7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms