Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AF238378.1-201ENST00000526806 358 ntBASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM54Q9BYV2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 AKR1C7P-201ENST00000305623 895 ntBASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 AP002414.1-201ENST00000391405 1147 ntBASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 AC073648.2-201ENST00000510116 352 ntBASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 AC006557.2-201ENST00000592985 1240 ntBASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM54Q9BYV2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 AC243591.1-201ENST00000452967 1364 ntBASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM54Q9BYV2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM54Q9BYV2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms