Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.67■□□□□ 0.26
HDAC8Q9BY41 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC060834.1-201ENST00000443027 2032 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 CNN2P2-201ENST00000443536 909 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 CNN2P3-201ENST00000450201 906 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC067863.1-201ENST00000494933 530 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC105233.2-201ENST00000523697 349 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AF228730.5-201ENST00000530288 346 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AL138918.1-201ENST00000568306 659 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC073389.1-201ENST00000595595 795 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AL136317.3-201ENST00000618497 906 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 PCDHB18P-201ENST00000524813 2368 ntBASIC16.66■□□□□ 0.26
HDAC8Q9BY41 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HDAC8Q9BY41 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 FAM86GP-201ENST00000448322 971 ntBASIC16.65■□□□□ 0.26
HDAC8Q9BY41 AC069262.1-201ENST00000539058 672 ntBASIC16.65■□□□□ 0.26
HDAC8Q9BY41 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 AC026150.2-201ENST00000564693 1156 ntBASIC16.65■□□□□ 0.26
HDAC8Q9BY41 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 Z92544.3-201ENST00000624747 417 ntBASIC16.65■□□□□ 0.26
HDAC8Q9BY41 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HDAC8Q9BY41 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
HDAC8Q9BY41 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
HDAC8Q9BY41 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC8Q9BY41 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC8Q9BY41 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HDAC8Q9BY41 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms