Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL25A1Q9BXS0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL25A1Q9BXS0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL25A1Q9BXS0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 AC098935.1-201ENST00000446057 611 ntBASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 AP001065.2-201ENST00000617205 644 ntBASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 AC092667.1-201ENST00000434301 2586 ntBASIC16.75■□□□□ 0.27
COL25A1Q9BXS0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 LINC00895-201ENST00000629028 1637 ntBASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AC134312.5-201ENST00000568031 1313 ntBASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AC016700.1-201ENST00000429424 312 ntBASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 RN7SL8P-201ENST00000461771 266 ntBASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 AC073439.1-201ENST00000624121 1774 ntBASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.74■□□□□ 0.27
COL25A1Q9BXS0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AC036164.1-201ENST00000570544 333 ntBASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AL096828.3-201ENST00000615354 462 ntBASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.73■□□□□ 0.27
COL25A1Q9BXS0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms