Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF1Q9BSM1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 PMS2P7-201ENST00000506558 1336 ntBASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC007967.2-201ENST00000432613 625 ntBASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC108751.1-201ENST00000490852 363 ntBASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC034105.1-201ENST00000563488 319 ntBASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 AC140113.2-201ENST00000604370 208 ntBASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCGF1Q9BSM1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCGF1Q9BSM1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 CROCCP2-202ENST00000412962 2773 ntBASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms