Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 NSUN5P1-202ENST00000421140 1535 ntBASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 NSUN5P2-203ENST00000457352 1529 ntBASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDHD3Q9BSH5 NFIC-211ENST00000641145 8399 ntBASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 AL020989.1-201ENST00000422979 469 ntBASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 SIGLEC30P-201ENST00000455569 941 ntBASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 TPSP2-201ENST00000561760 610 ntBASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 LINC00554-201ENST00000564841 3011 ntBASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 AL121956.5-201ENST00000625261 221 ntBASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HDHD3Q9BSH5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDHD3Q9BSH5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 ACTG1P4-201ENST00000425123 1122 ntBASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 AP002383.4-201ENST00000442518 975 ntBASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 LINC00265-3P-201ENST00000447588 903 ntBASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 TSSC2-201ENST00000450217 709 ntBASIC14.27□□□□□ -0.13
HDHD3Q9BSH5 KRT17P6-201ENST00000453795 1220 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms