Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CCL13Q99616 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 PCDHA12-202ENST00000613593 2588 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL13Q99616 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL13Q99616 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCL13Q99616 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 MED15P5-201ENST00000423150 992 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 HCG4B-203ENST00000450128 991 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 CXCL1P1-201ENST00000502804 216 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL13Q99616 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL13Q99616 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL13Q99616 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL13Q99616 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 AC140113.2-201ENST00000604370 208 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 AC027601.4-201ENST00000611259 610 ntBASIC14.13□□□□□ -0.15
CCL13Q99616 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL13Q99616 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL13Q99616 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CCL13Q99616 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL13Q99616 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CCL13Q99616 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 IGLL3P-201ENST00000412472 434 ntBASIC14.12□□□□□ -0.15
CCL13Q99616 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.12□□□□□ -0.15
CCL13Q99616 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.12□□□□□ -0.15
CCL13Q99616 FAM185BP-201ENST00000443595 716 ntBASIC14.12□□□□□ -0.15
CCL13Q99616 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CCL13Q99616 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCL13Q99616 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CCL13Q99616 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL13Q99616 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms