Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
MS4A4EQ96PG1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AC092171.3-201ENST00000610122 2651 ntBASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 IGHV3-65-201ENST00000523210 341 ntBASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 MPDU1-223ENST00000582151 728 ntBASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AL773604.1-201ENST00000617417 272 ntBASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AC006538.1-201ENST00000567905 1585 ntBASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MS4A4EQ96PG1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AP002414.3-201ENST00000589352 1468 ntBASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AC107918.2-201ENST00000530817 355 ntBASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AP002469.2-201ENST00000531724 424 ntBASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AC012640.2-201ENST00000561606 901 ntBASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AC148477.8-201ENST00000624298 468 ntBASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 FAM215A-202ENST00000632077 792 ntBASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MS4A4EQ96PG1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 AC129492.6-201ENST00000611383 1305 ntBASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
MS4A4EQ96PG1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms