Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
COL21A1Q96P44 AC004817.3-201ENST00000602957 2129 ntBASIC16■□□□□ 0.15
COL21A1Q96P44 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
COL21A1Q96P44 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 PCDHA1-201ENST00000378133 2726 ntBASIC15.99■□□□□ 0.15
COL21A1Q96P44 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 AC078925.2-201ENST00000624013 1973 ntBASIC15.99■□□□□ 0.15
COL21A1Q96P44 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 FAM197Y8-203ENST00000450145 560 ntBASIC15.99■□□□□ 0.15
COL21A1Q96P44 AC073648.2-201ENST00000510116 352 ntBASIC15.99■□□□□ 0.15
COL21A1Q96P44 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 MTDHP4-201ENST00000600287 670 ntBASIC15.99■□□□□ 0.15
COL21A1Q96P44 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL21A1Q96P44 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COL21A1Q96P44 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 GPR89P-201ENST00000407924 1495 ntBASIC15.98■□□□□ 0.15
COL21A1Q96P44 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 AC021087.4-201ENST00000563761 564 ntBASIC15.98■□□□□ 0.15
COL21A1Q96P44 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 TP73-AS1-207ENST00000624167 988 ntBASIC15.98■□□□□ 0.15
COL21A1Q96P44 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL21A1Q96P44 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.98■□□□□ 0.15
COL21A1Q96P44 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 AC097637.2-201ENST00000624096 1997 ntBASIC15.97■□□□□ 0.15
COL21A1Q96P44 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 AF186996.4-201ENST00000467186 377 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms