Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 AC104581.1-202ENST00000635932 2618 ntBASIC19.49■□□□□ 0.71
CDCA5Q96FF9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.49■□□□□ 0.71
CDCA5Q96FF9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 AC133552.6-201ENST00000613406 534 ntBASIC19.49■□□□□ 0.71
CDCA5Q96FF9 AC004461.2-201ENST00000629517 803 ntBASIC19.49■□□□□ 0.71
CDCA5Q96FF9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA5Q96FF9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC098850.1-201ENST00000419919 790 ntBASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AL589987.1-201ENST00000453380 819 ntBASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.48■□□□□ 0.71
CDCA5Q96FF9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC009113.1-201ENST00000570267 2443 ntBASIC19.48■□□□□ 0.71
CDCA5Q96FF9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 AC108860.2-201ENST00000562760 2183 ntBASIC19.48■□□□□ 0.71
CDCA5Q96FF9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA5Q96FF9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 AC098818.2-201ENST00000564925 2320 ntBASIC19.47■□□□□ 0.71
CDCA5Q96FF9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 MEP1AP4-201ENST00000423244 1087 ntBASIC19.47■□□□□ 0.71
CDCA5Q96FF9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.47■□□□□ 0.71
CDCA5Q96FF9 AL033527.5-202ENST00000641632 1098 ntBASIC19.47■□□□□ 0.71
CDCA5Q96FF9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 TNXA-203ENST00000507684 2038 ntBASIC19.47■□□□□ 0.71
CDCA5Q96FF9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA5Q96FF9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA5Q96FF9 FAM8A2P-201ENST00000528813 1142 ntBASIC19.46■□□□□ 0.71
CDCA5Q96FF9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms