Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HTRA1Q92743 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HTRA1Q92743 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.69■□□□□ 0.1
HTRA1Q92743 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HTRA1Q92743 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HTRA1Q92743 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.68■□□□□ 0.1
HTRA1Q92743 CHCHD2P8-201ENST00000429873 447 ntBASIC15.68■□□□□ 0.1
HTRA1Q92743 RN7SL606P-201ENST00000472779 293 ntBASIC15.68■□□□□ 0.1
HTRA1Q92743 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 UNC93B7-201ENST00000509439 705 ntBASIC15.68■□□□□ 0.1
HTRA1Q92743 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.68■□□□□ 0.1
HTRA1Q92743 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.68■□□□□ 0.1
HTRA1Q92743 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.68■□□□□ 0.1
HTRA1Q92743 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.68■□□□□ 0.1
HTRA1Q92743 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HTRA1Q92743 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 AL662844.4-201ENST00000606367 2838 ntBASIC15.68■□□□□ 0.1
HTRA1Q92743 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.68■□□□□ 0.1
HTRA1Q92743 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HTRA1Q92743 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HTRA1Q92743 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HTRA1Q92743 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.68■□□□□ 0.1
HTRA1Q92743 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HTRA1Q92743 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 AC144831.1-201ENST00000573312 2656 ntBASIC15.67■□□□□ 0.1
HTRA1Q92743 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
HTRA1Q92743 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 GUSBP12-201ENST00000513727 720 ntBASIC15.67■□□□□ 0.1
HTRA1Q92743 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 RN7SL510P-201ENST00000581311 263 ntBASIC15.67■□□□□ 0.1
HTRA1Q92743 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.67■□□□□ 0.1
HTRA1Q92743 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.67■□□□□ 0.1
HTRA1Q92743 AL732292.2-201ENST00000609649 430 ntBASIC15.67■□□□□ 0.1
HTRA1Q92743 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HTRA1Q92743 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.67■□□□□ 0.1
HTRA1Q92743 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms