Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 AC145285.3-201ENST00000564603 959 ntBASIC13.65□□□□□ -0.22
LINC00311Q8N616 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 Z83851.2-201ENST00000609564 659 ntBASIC13.65□□□□□ -0.22
LINC00311Q8N616 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00311Q8N616 PCDHA14-201ENST00000506751 2298 ntBASIC13.65□□□□□ -0.22
LINC00311Q8N616 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00311Q8N616 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00311Q8N616 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 FDX1P1-201ENST00000449115 551 ntBASIC13.64□□□□□ -0.23
LINC00311Q8N616 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.64□□□□□ -0.23
LINC00311Q8N616 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 AC096734.2-201ENST00000562054 433 ntBASIC13.64□□□□□ -0.23
LINC00311Q8N616 MIR3909-201ENST00000579518 119 ntBASIC13.64□□□□□ -0.23
LINC00311Q8N616 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 AL512652.2-201ENST00000625156 1716 ntBASIC13.64□□□□□ -0.23
LINC00311Q8N616 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00311Q8N616 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
LINC00311Q8N616 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 GGT3P-204ENST00000453783 1664 ntBASIC13.63□□□□□ -0.23
LINC00311Q8N616 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 RHOQP3-201ENST00000437982 621 ntBASIC13.63□□□□□ -0.23
LINC00311Q8N616 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 AL031432.2-201ENST00000566714 459 ntBASIC13.63□□□□□ -0.23
LINC00311Q8N616 AL928711.1-201ENST00000570165 459 ntBASIC13.63□□□□□ -0.23
LINC00311Q8N616 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.63□□□□□ -0.23
LINC00311Q8N616 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00311Q8N616 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00311Q8N616 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms