Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
COL27A1Q8IZC6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AL512384.1-201ENST00000406683 331 ntBASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AC092337.1-201ENST00000568699 1129 ntBASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AC024267.1-201ENST00000582320 895 ntBASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AC099568.2-201ENST00000609194 695 ntBASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AC004461.2-201ENST00000629517 803 ntBASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AL109936.8-201ENST00000641772 604 ntBASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.62■□□□□ 0.09
COL27A1Q8IZC6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AC008735.3-201ENST00000596646 500 ntBASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 RPSAP52-203ENST00000622976 1023 ntBASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AL139011.1-202ENST00000642063 584 ntBASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 NEFHP1-201ENST00000412845 2629 ntBASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 PP12613-201ENST00000424958 2230 ntBASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 USP32P1-208ENST00000506594 1164 ntBASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL27A1Q8IZC6 AL031731.1-201ENST00000642131 2094 ntBASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL27A1Q8IZC6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms