Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLF2Q8IX21 AC107890.1-201ENST00000422478 521 ntBASIC20.03■□□□□ 0.8
SLF2Q8IX21 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 AC125807.1-201ENST00000483097 614 ntBASIC20.03■□□□□ 0.8
SLF2Q8IX21 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 AC005498.2-205ENST00000593218 784 ntBASIC20.03■□□□□ 0.8
SLF2Q8IX21 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF2Q8IX21 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF2Q8IX21 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF2Q8IX21 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.03■□□□□ 0.8
SLF2Q8IX21 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF2Q8IX21 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLF2Q8IX21 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 BCRP1-201ENST00000444246 691 ntBASIC20.02■□□□□ 0.8
SLF2Q8IX21 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 DUX4L27-201ENST00000554796 1261 ntBASIC20.02■□□□□ 0.8
SLF2Q8IX21 AC140878.1-201ENST00000565277 250 ntBASIC20.02■□□□□ 0.8
SLF2Q8IX21 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLF2Q8IX21 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLF2Q8IX21 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLF2Q8IX21 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLF2Q8IX21 AC092053.1-201ENST00000605787 1936 ntBASIC20.02■□□□□ 0.79
SLF2Q8IX21 AL023806.1-201ENST00000603994 1649 ntBASIC20.02■□□□□ 0.79
SLF2Q8IX21 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLF2Q8IX21 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 AL138918.1-201ENST00000568306 659 ntBASIC20.01■□□□□ 0.79
SLF2Q8IX21 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 AC073389.1-201ENST00000595595 795 ntBASIC20.01■□□□□ 0.79
SLF2Q8IX21 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLF2Q8IX21 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.01■□□□□ 0.79
SLF2Q8IX21 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SLF2Q8IX21 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLF2Q8IX21 AC008677.1-201ENST00000519230 1561 ntBASIC20■□□□□ 0.79
SLF2Q8IX21 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLF2Q8IX21 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLF2Q8IX21 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLF2Q8IX21 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF2Q8IX21 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20■□□□□ 0.79
SLF2Q8IX21 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLF2Q8IX21 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLF2Q8IX21 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLF2Q8IX21 MIR943-201ENST00000401286 94 ntBASIC20■□□□□ 0.79
SLF2Q8IX21 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20■□□□□ 0.79
SLF2Q8IX21 BASP1P1-201ENST00000430708 665 ntBASIC20■□□□□ 0.79
SLF2Q8IX21 AC055876.3-201ENST00000431496 288 ntBASIC20■□□□□ 0.79
SLF2Q8IX21 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20■□□□□ 0.79
SLF2Q8IX21 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20■□□□□ 0.79
SLF2Q8IX21 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20■□□□□ 0.79
SLF2Q8IX21 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20■□□□□ 0.79
SLF2Q8IX21 AC138649.4-201ENST00000612222 287 ntBASIC20■□□□□ 0.79
SLF2Q8IX21 MIR6080-201ENST00000617359 66 ntBASIC20■□□□□ 0.79
SLF2Q8IX21 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms