Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS4Q8IUM7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AC073439.1-201ENST00000624121 1774 ntBASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 CETN4P-206ENST00000642099 2168 ntBASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AC009477.1-201ENST00000452936 217 ntBASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AL596325.1-201ENST00000563991 1082 ntBASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 AC138932.1-201ENST00000534164 6830 ntBASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS4Q8IUM7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 AC098859.1-201ENST00000502915 1238 ntBASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 AC013467.2-201ENST00000605472 835 ntBASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 TEX28P1-201ENST00000613479 1221 ntBASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 TEX28P2-201ENST00000617764 1221 ntBASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 AC087499.5-201ENST00000452760 1342 ntBASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NPAS4Q8IUM7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS4Q8IUM7 NME2P1-201ENST00000426182 414 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms