Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 KRT8P49-201ENST00000604166 1432 ntBASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 SLC22A20-204ENST00000530038 1673 ntBASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 MIR940-201ENST00000401276 94 ntBASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 GGTLC5P-201ENST00000617623 998 ntBASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB11FIP4Q86YS3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 AL391256.1-201ENST00000443260 1855 ntBASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 AL671710.1-201ENST00000610245 2349 ntBASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 KRT18P2-201ENST00000447938 1258 ntBASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 PCDH8P1-201ENST00000428983 2773 ntBASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RAB11FIP4Q86YS3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 AL022342.1-201ENST00000400363 863 ntBASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 VN2R19P-201ENST00000442399 1052 ntBASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 ACTL9-202ENST00000612068 1252 ntBASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 AL021920.2-201ENST00000624828 1351 ntBASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB11FIP4Q86YS3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.77■□□□□ 0.75
RAB11FIP4Q86YS3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RAB11FIP4Q86YS3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RAB11FIP4Q86YS3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAB11FIP4Q86YS3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms