Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 KRT223P-202ENST00000449164 1292 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 USP32P1-208ENST00000506594 1164 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AL079307.3-201ENST00000556114 283 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC087499.5-201ENST00000452760 1342 ntBASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13BQ7Z7G8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 AC234783.1-201ENST00000441761 496 ntBASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 INE1-201ENST00000456273 945 ntBASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 CROCCP4-201ENST00000457096 498 ntBASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
VPS13BQ7Z7G8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms