Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 AC005336.2-201ENST00000593183 939 ntBASIC13.89□□□□□ -0.19
TREML4Q6UXN2 AC008147.4-201ENST00000617570 1204 ntBASIC13.89□□□□□ -0.19
TREML4Q6UXN2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 AL139384.1-201ENST00000612143 3047 ntBASIC13.89□□□□□ -0.19
TREML4Q6UXN2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TREML4Q6UXN2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 INTS4P1-201ENST00000438455 1935 ntBASIC13.88□□□□□ -0.19
TREML4Q6UXN2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AC046185.3-201ENST00000623228 1824 ntBASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 HLA-J-203ENST00000494367 1087 ntBASIC13.88□□□□□ -0.19
TREML4Q6UXN2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AC005829.1-201ENST00000570002 483 ntBASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AL136370.1-201ENST00000608166 691 ntBASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AL133445.2-201ENST00000611191 527 ntBASIC13.88□□□□□ -0.19
TREML4Q6UXN2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TREML4Q6UXN2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 LINC02012-201ENST00000608206 1725 ntBASIC13.87□□□□□ -0.19
TREML4Q6UXN2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 MIR770-201ENST00000390219 98 ntBASIC13.87□□□□□ -0.19
TREML4Q6UXN2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 AL117351.1-201ENST00000438864 766 ntBASIC13.87□□□□□ -0.19
TREML4Q6UXN2 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 ABCD1P5-201ENST00000445663 754 ntBASIC13.87□□□□□ -0.19
TREML4Q6UXN2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.87□□□□□ -0.19
TREML4Q6UXN2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms