Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 KRT18P32-201ENST00000424695 1287 ntBASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AC021097.1-201ENST00000607902 574 ntBASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AC093512.1-201ENST00000617969 520 ntBASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AC084121.4-201ENST00000641598 221 ntBASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AF228730.8-201ENST00000642140 221 ntBASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DCLRE1AQ6PJP8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 AL645608.8-201ENST00000606034 2086 ntBASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 AL512356.2-201ENST00000546955 174 ntBASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DCLRE1AQ6PJP8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 UXT-AS1-201ENST00000590504 1525 ntBASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 AC008267.7-201ENST00000624570 1194 ntBASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DCLRE1AQ6PJP8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms