Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 AP000344.2-201ENST00000512987 629 ntBASIC15.23■□□□□ 0.03
RTL6Q6ICC9 AC107918.2-201ENST00000530817 355 ntBASIC15.23■□□□□ 0.03
RTL6Q6ICC9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 AL513210.1-201ENST00000629608 234 ntBASIC15.23■□□□□ 0.03
RTL6Q6ICC9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 PP12613-201ENST00000424958 2230 ntBASIC15.23■□□□□ 0.03
RTL6Q6ICC9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTL6Q6ICC9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 CYMP-203ENST00000474680 1263 ntBASIC15.22■□□□□ 0.03
RTL6Q6ICC9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 AC105339.1-204ENST00000636249 355 ntBASIC15.22■□□□□ 0.03
RTL6Q6ICC9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.22■□□□□ 0.03
RTL6Q6ICC9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RTL6Q6ICC9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 AP001094.4-201ENST00000579008 2176 ntBASIC15.21■□□□□ 0.03
RTL6Q6ICC9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 REXO1L3P-201ENST00000622202 1288 ntBASIC15.21■□□□□ 0.03
RTL6Q6ICC9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RTL6Q6ICC9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.21■□□□□ 0.02
RTL6Q6ICC9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTL6Q6ICC9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RTL6Q6ICC9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RTL6Q6ICC9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms