Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RCN1P1-201ENST00000400413 996 ntBASIC16.32■□□□□ 0.2
RNF220Q5VTB9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AL671277.2-201ENST00000458060 996 ntBASIC16.32■□□□□ 0.2
RNF220Q5VTB9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF220Q5VTB9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 AC096633.1-201ENST00000422446 749 ntBASIC16.31■□□□□ 0.2
RNF220Q5VTB9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 DUX4L26-201ENST00000489078 1255 ntBASIC16.31■□□□□ 0.2
RNF220Q5VTB9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 RN7SL850P-201ENST00000579959 291 ntBASIC16.31■□□□□ 0.2
RNF220Q5VTB9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 AC073347.1-201ENST00000421633 2643 ntBASIC16.31■□□□□ 0.2
RNF220Q5VTB9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF220Q5VTB9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF220Q5VTB9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms