Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDS5AQ29RF7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 FAM220BP-201ENST00000377689 816 ntBASIC20.06■□□□□ 0.8
PDS5AQ29RF7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 RARRES2P9-201ENST00000565168 469 ntBASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AL096865.1-201ENST00000606796 927 ntBASIC20.06■□□□□ 0.8
PDS5AQ29RF7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 AL512652.2-201ENST00000625156 1716 ntBASIC20.06■□□□□ 0.8
PDS5AQ29RF7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDS5AQ29RF7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 AC107890.1-201ENST00000422478 521 ntBASIC20.05■□□□□ 0.8
PDS5AQ29RF7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 AC011467.4-201ENST00000594891 528 ntBASIC20.05■□□□□ 0.8
PDS5AQ29RF7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDS5AQ29RF7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 BCRP1-201ENST00000444246 691 ntBASIC20.04■□□□□ 0.8
PDS5AQ29RF7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 AC125807.1-201ENST00000483097 614 ntBASIC20.04■□□□□ 0.8
PDS5AQ29RF7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 DUX4L27-201ENST00000554796 1261 ntBASIC20.04■□□□□ 0.8
PDS5AQ29RF7 AL158211.3-201ENST00000607385 239 ntBASIC20.04■□□□□ 0.8
PDS5AQ29RF7 MIR6080-201ENST00000617359 66 ntBASIC20.04■□□□□ 0.8
PDS5AQ29RF7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDS5AQ29RF7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms