Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM1Q15032 MIR33B-201ENST00000385104 96 ntBASIC20.92■□□□□ 0.94
R3HDM1Q15032 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 MIR6069-201ENST00000620069 79 ntBASIC20.92■□□□□ 0.94
R3HDM1Q15032 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM1Q15032 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM1Q15032 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM1Q15032 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM1Q15032 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
R3HDM1Q15032 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM1Q15032 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 TIMM17BP1-201ENST00000545713 516 ntBASIC20.91■□□□□ 0.94
R3HDM1Q15032 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
R3HDM1Q15032 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HDM1Q15032 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 RPL17P11-201ENST00000417593 544 ntBASIC20.9■□□□□ 0.94
R3HDM1Q15032 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HDM1Q15032 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM1Q15032 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3HDM1Q15032 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.89■□□□□ 0.94
R3HDM1Q15032 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3HDM1Q15032 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
R3HDM1Q15032 AP000997.3-201ENST00000623333 2250 ntBASIC20.89■□□□□ 0.94
R3HDM1Q15032 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
R3HDM1Q15032 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
R3HDM1Q15032 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.89■□□□□ 0.94
R3HDM1Q15032 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM1Q15032 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 SPDYE17-201ENST00000412399 783 ntBASIC20.89■□□□□ 0.93
R3HDM1Q15032 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 FNTAP2-201ENST00000430308 634 ntBASIC20.89■□□□□ 0.93
R3HDM1Q15032 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 DUX4L45-201ENST00000566406 1057 ntBASIC20.89■□□□□ 0.93
R3HDM1Q15032 AC133539.2-201ENST00000604757 467 ntBASIC20.89■□□□□ 0.93
R3HDM1Q15032 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM1Q15032 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM1Q15032 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM1Q15032 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.89■□□□□ 0.93
R3HDM1Q15032 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM1Q15032 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
R3HDM1Q15032 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM1Q15032 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.88■□□□□ 0.93
R3HDM1Q15032 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM1Q15032 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
R3HDM1Q15032 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM1Q15032 AL355334.1-201ENST00000417713 215 ntBASIC20.88■□□□□ 0.93
R3HDM1Q15032 FTH1P14-201ENST00000482930 551 ntBASIC20.88■□□□□ 0.93
R3HDM1Q15032 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms