Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH17Q12864 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH17Q12864 FAM197Y8-203ENST00000450145 560 ntBASIC17.04■□□□□ 0.32
CDH17Q12864 SLC25A6P2-201ENST00000497974 877 ntBASIC17.04■□□□□ 0.32
CDH17Q12864 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH17Q12864 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH17Q12864 TP73-AS1-207ENST00000624167 988 ntBASIC17.04■□□□□ 0.32
CDH17Q12864 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDH17Q12864 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH17Q12864 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH17Q12864 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH17Q12864 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH17Q12864 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CDH17Q12864 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH17Q12864 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH17Q12864 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH17Q12864 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH17Q12864 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH17Q12864 AC091167.2-201ENST00000579581 588 ntBASIC17.03■□□□□ 0.32
CDH17Q12864 MPDU1-223ENST00000582151 728 ntBASIC17.03■□□□□ 0.32
CDH17Q12864 MIR1199-201ENST00000621445 119 ntBASIC17.03■□□□□ 0.32
CDH17Q12864 AC008735.5-201ENST00000623544 497 ntBASIC17.03■□□□□ 0.32
CDH17Q12864 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH17Q12864 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH17Q12864 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH17Q12864 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH17Q12864 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
CDH17Q12864 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH17Q12864 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH17Q12864 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH17Q12864 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH17Q12864 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH17Q12864 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH17Q12864 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 KRT18P67-201ENST00000432816 1264 ntBASIC17.02■□□□□ 0.32
CDH17Q12864 AC018712.1-201ENST00000455767 687 ntBASIC17.02■□□□□ 0.32
CDH17Q12864 AF186996.4-201ENST00000467186 377 ntBASIC17.02■□□□□ 0.32
CDH17Q12864 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH17Q12864 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH17Q12864 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CDH17Q12864 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH17Q12864 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDH17Q12864 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH17Q12864 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH17Q12864 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH17Q12864 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH17Q12864 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH17Q12864 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH17Q12864 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH17Q12864 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH17Q12864 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH17Q12864 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms