Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
COL10A1Q03692 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.28□□□□□ -0.12
COL10A1Q03692 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.28□□□□□ -0.12
COL10A1Q03692 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
COL10A1Q03692 AL121912.1-201ENST00000603683 238 ntBASIC14.28□□□□□ -0.12
COL10A1Q03692 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL10A1Q03692 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
COL10A1Q03692 FLJ38576-201ENST00000623820 2459 ntBASIC14.27□□□□□ -0.12
COL10A1Q03692 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 PCDHB19P-201ENST00000570871 2371 ntBASIC14.27□□□□□ -0.12
COL10A1Q03692 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
COL10A1Q03692 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.27□□□□□ -0.12
COL10A1Q03692 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
COL10A1Q03692 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.27□□□□□ -0.12
COL10A1Q03692 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL10A1Q03692 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.27□□□□□ -0.12
COL10A1Q03692 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL10A1Q03692 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
COL10A1Q03692 TUBB8P12-201ENST00000308911 1335 ntBASIC14.27□□□□□ -0.12
COL10A1Q03692 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
COL10A1Q03692 TUBB7P-202ENST00000428444 1305 ntBASIC14.27□□□□□ -0.12
COL10A1Q03692 TUBB8P7-204ENST00000567960 1332 ntBASIC14.27□□□□□ -0.12
COL10A1Q03692 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 FAM197Y8-203ENST00000450145 560 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.27□□□□□ -0.13
COL10A1Q03692 RNPS1P1-201ENST00000507437 918 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.27□□□□□ -0.13
COL10A1Q03692 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.27□□□□□ -0.13
COL10A1Q03692 RN7SL510P-201ENST00000581311 263 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 AC006557.2-201ENST00000592985 1240 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 TERC-201ENST00000602385 541 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.27□□□□□ -0.13
COL10A1Q03692 TP73-AS1-207ENST00000624167 988 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 AC107918.4-202ENST00000641623 219 ntBASIC14.27□□□□□ -0.13
COL10A1Q03692 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
COL10A1Q03692 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.27□□□□□ -0.13
COL10A1Q03692 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
COL10A1Q03692 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.27□□□□□ -0.13
COL10A1Q03692 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL10A1Q03692 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AC006504.4-201ENST00000592118 1568 ntBASIC14.26□□□□□ -0.13
COL10A1Q03692 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.26□□□□□ -0.13
COL10A1Q03692 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL10A1Q03692 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL10A1Q03692 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AL021920.2-201ENST00000624828 1351 ntBASIC14.26□□□□□ -0.13
COL10A1Q03692 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
COL10A1Q03692 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 AC004870.1-201ENST00000315132 882 ntBASIC14.26□□□□□ -0.13
COL10A1Q03692 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
COL10A1Q03692 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.26□□□□□ -0.13
COL10A1Q03692 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.26□□□□□ -0.13
COL10A1Q03692 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.26□□□□□ -0.13
COL10A1Q03692 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 PCDHB17P-201ENST00000539533 2393 ntBASIC14.26□□□□□ -0.13
COL10A1Q03692 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.26□□□□□ -0.13
COL10A1Q03692 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL10A1Q03692 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms