Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CCNA1P78396 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCNA1P78396 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 CETN4P-206ENST00000642099 2168 ntBASIC19.05■□□□□ 0.64
CCNA1P78396 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.05■□□□□ 0.64
CCNA1P78396 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCNA1P78396 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.05■□□□□ 0.64
CCNA1P78396 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.04■□□□□ 0.64
CCNA1P78396 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCNA1P78396 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.04■□□□□ 0.64
CCNA1P78396 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 FAM220BP-201ENST00000377689 816 ntBASIC19.04■□□□□ 0.64
CCNA1P78396 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.04■□□□□ 0.64
CCNA1P78396 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.04■□□□□ 0.64
CCNA1P78396 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 SPTLC1P1-201ENST00000447199 261 ntBASIC19.04■□□□□ 0.64
CCNA1P78396 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.04■□□□□ 0.64
CCNA1P78396 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.04■□□□□ 0.64
CCNA1P78396 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.04■□□□□ 0.64
CCNA1P78396 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.04■□□□□ 0.64
CCNA1P78396 SPTSSB-204ENST00000617024 1292 ntBASIC19.04■□□□□ 0.64
CCNA1P78396 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCNA1P78396 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCNA1P78396 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCNA1P78396 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CCNA1P78396 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCNA1P78396 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.03■□□□□ 0.64
CCNA1P78396 AC108860.2-201ENST00000562760 2183 ntBASIC19.03■□□□□ 0.64
CCNA1P78396 TUBB8P12-201ENST00000308911 1335 ntBASIC19.03■□□□□ 0.64
CCNA1P78396 TUBB7P-202ENST00000428444 1305 ntBASIC19.03■□□□□ 0.64
CCNA1P78396 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.03■□□□□ 0.64
CCNA1P78396 TUBB8P7-204ENST00000567960 1332 ntBASIC19.03■□□□□ 0.64
CCNA1P78396 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CCNA1P78396 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CCNA1P78396 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.03■□□□□ 0.64
CCNA1P78396 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.03■□□□□ 0.64
CCNA1P78396 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.03■□□□□ 0.64
CCNA1P78396 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.03■□□□□ 0.64
CCNA1P78396 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.03■□□□□ 0.64
CCNA1P78396 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCNA1P78396 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.03■□□□□ 0.64
CCNA1P78396 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.03■□□□□ 0.64
CCNA1P78396 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
CCNA1P78396 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCNA1P78396 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCNA1P78396 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.02■□□□□ 0.64
CCNA1P78396 AC087499.5-201ENST00000452760 1342 ntBASIC19.02■□□□□ 0.64
CCNA1P78396 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCNA1P78396 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms