Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 AC148477.8-201ENST00000624298 468 ntBASIC14.75□□□□□ -0.05
HIST1H3AP68431 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 AC092171.3-201ENST00000610122 2651 ntBASIC14.75□□□□□ -0.05
HIST1H3AP68431 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H3AP68431 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H3AP68431 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 AC129492.6-201ENST00000611383 1305 ntBASIC14.74□□□□□ -0.05
HIST1H3AP68431 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 RPS2P28-201ENST00000314255 741 ntBASIC14.74□□□□□ -0.05
HIST1H3AP68431 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 AL031008.1-201ENST00000619963 541 ntBASIC14.74□□□□□ -0.05
HIST1H3AP68431 MIR1199-201ENST00000621445 119 ntBASIC14.74□□□□□ -0.05
HIST1H3AP68431 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 AP002414.3-201ENST00000589352 1468 ntBASIC14.74□□□□□ -0.05
HIST1H3AP68431 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H3AP68431 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H3AP68431 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 FAM215A-202ENST00000632077 792 ntBASIC14.73□□□□□ -0.05
HIST1H3AP68431 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 SLC22A20-204ENST00000530038 1673 ntBASIC14.73□□□□□ -0.05
HIST1H3AP68431 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H3AP68431 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H3AP68431 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms