Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MCCD1P2-201ENST00000423228 335 ntBASIC18.55■□□□□ 0.56
PEX3P56589 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.55■□□□□ 0.56
PEX3P56589 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PEX3P56589 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 LINC00895-201ENST00000629028 1637 ntBASIC18.55■□□□□ 0.56
PEX3P56589 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.55■□□□□ 0.56
PEX3P56589 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PEX3P56589 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
PEX3P56589 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PEX3P56589 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PEX3P56589 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PEX3P56589 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PEX3P56589 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PEX3P56589 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PEX3P56589 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PEX3P56589 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.54■□□□□ 0.56
PEX3P56589 AP002490.2-201ENST00000524791 560 ntBASIC18.54■□□□□ 0.56
PEX3P56589 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.54■□□□□ 0.56
PEX3P56589 AC023511.2-201ENST00000618803 211 ntBASIC18.54■□□□□ 0.56
PEX3P56589 AP001350.2-201ENST00000625104 1094 ntBASIC18.54■□□□□ 0.56
PEX3P56589 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.54■□□□□ 0.56
PEX3P56589 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PEX3P56589 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.54■□□□□ 0.56
PEX3P56589 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.54■□□□□ 0.56
PEX3P56589 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PEX3P56589 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PEX3P56589 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
PEX3P56589 AD000864.1-201ENST00000624076 2295 ntBASIC18.53■□□□□ 0.56
PEX3P56589 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.53■□□□□ 0.56
PEX3P56589 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
PEX3P56589 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.53■□□□□ 0.56
PEX3P56589 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PEX3P56589 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.53■□□□□ 0.56
PEX3P56589 MTDHP5-201ENST00000598980 586 ntBASIC18.53■□□□□ 0.56
PEX3P56589 AC068137.2-201ENST00000605408 478 ntBASIC18.53■□□□□ 0.56
PEX3P56589 AC013467.2-201ENST00000605472 835 ntBASIC18.53■□□□□ 0.56
PEX3P56589 AL671710.1-201ENST00000610245 2349 ntBASIC18.53■□□□□ 0.56
PEX3P56589 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.53■□□□□ 0.56
PEX3P56589 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PEX3P56589 PCDHA12-202ENST00000613593 2588 ntBASIC18.53■□□□□ 0.56
PEX3P56589 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.53■□□□□ 0.56
PEX3P56589 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.53■□□□□ 0.56
PEX3P56589 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PEX3P56589 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PEX3P56589 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms