Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH8P55286 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH8P55286 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 AGGF1P2-201ENST00000426656 2106 ntBASIC17.96■□□□□ 0.47
CDH8P55286 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH8P55286 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.96■□□□□ 0.47
CDH8P55286 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH8P55286 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CDH8P55286 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CDH8P55286 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH8P55286 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH8P55286 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH8P55286 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH8P55286 YBX2P1-201ENST00000394192 760 ntBASIC17.96■□□□□ 0.47
CDH8P55286 AC004832.2-201ENST00000426397 482 ntBASIC17.96■□□□□ 0.47
CDH8P55286 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH8P55286 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CDH8P55286 AL645728.2-201ENST00000641974 660 ntBASIC17.96■□□□□ 0.47
CDH8P55286 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH8P55286 AC092171.3-201ENST00000610122 2651 ntBASIC17.96■□□□□ 0.47
CDH8P55286 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 SNX33P1-201ENST00000592116 1762 ntBASIC17.96■□□□□ 0.47
CDH8P55286 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH8P55286 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH8P55286 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH8P55286 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CDH8P55286 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.96■□□□□ 0.46
CDH8P55286 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH8P55286 NKILA-202ENST00000614771 2598 ntBASIC17.95■□□□□ 0.46
CDH8P55286 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH8P55286 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH8P55286 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 HCG4-201ENST00000418983 998 ntBASIC17.95■□□□□ 0.46
CDH8P55286 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH8P55286 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH8P55286 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH8P55286 AC013467.2-201ENST00000605472 835 ntBASIC17.95■□□□□ 0.46
CDH8P55286 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH8P55286 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH8P55286 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH8P55286 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH8P55286 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CDH8P55286 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH8P55286 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH8P55286 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH8P55286 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDH8P55286 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH8P55286 AC009053.2-201ENST00000563701 2365 ntBASIC17.94■□□□□ 0.46
CDH8P55286 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH8P55286 MCCD1P2-201ENST00000423228 335 ntBASIC17.94■□□□□ 0.46
CDH8P55286 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH8P55286 AC092865.5-201ENST00000545435 363 ntBASIC17.94■□□□□ 0.46
CDH8P55286 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH8P55286 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH8P55286 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH8P55286 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH8P55286 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH8P55286 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms