Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL391256.1-201ENST00000443260 1855 ntBASIC17.03■□□□□ 0.32
LIMK2P53671 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LIMK2P53671 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 SIGLEC16-201ENST00000599858 1437 ntBASIC17.03■□□□□ 0.32
LIMK2P53671 AC104109.2-201ENST00000602919 1418 ntBASIC17.03■□□□□ 0.32
LIMK2P53671 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LIMK2P53671 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.02■□□□□ 0.32
LIMK2P53671 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LIMK2P53671 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LIMK2P53671 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 AC004817.3-201ENST00000602957 2129 ntBASIC17.02■□□□□ 0.32
LIMK2P53671 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LIMK2P53671 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 AC105339.3-201ENST00000560043 636 ntBASIC17.02■□□□□ 0.32
LIMK2P53671 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.02■□□□□ 0.32
LIMK2P53671 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.02■□□□□ 0.32
LIMK2P53671 AC139530.3-201ENST00000620344 690 ntBASIC17.02■□□□□ 0.32
LIMK2P53671 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
LIMK2P53671 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
LIMK2P53671 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.02■□□□□ 0.32
LIMK2P53671 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LIMK2P53671 PCDH8P1-201ENST00000428983 2773 ntBASIC17.02■□□□□ 0.31
LIMK2P53671 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.02■□□□□ 0.31
LIMK2P53671 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
LIMK2P53671 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LIMK2P53671 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.01■□□□□ 0.31
LIMK2P53671 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.01■□□□□ 0.31
LIMK2P53671 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LIMK2P53671 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 LAGE3P1-201ENST00000425356 484 ntBASIC17.01■□□□□ 0.31
LIMK2P53671 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.01■□□□□ 0.31
LIMK2P53671 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 AC073592.4-201ENST00000623827 446 ntBASIC17.01■□□□□ 0.31
LIMK2P53671 AL022326.1-202ENST00000641533 845 ntBASIC17.01■□□□□ 0.31
LIMK2P53671 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.01■□□□□ 0.31
LIMK2P53671 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.01■□□□□ 0.31
LIMK2P53671 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.01■□□□□ 0.31
LIMK2P53671 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK2P53671 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.01■□□□□ 0.31
LIMK2P53671 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 AC097637.2-201ENST00000624096 1997 ntBASIC17■□□□□ 0.31
LIMK2P53671 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
LIMK2P53671 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LIMK2P53671 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LIMK2P53671 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LIMK2P53671 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK2P53671 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms