Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEK3P51956 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.44■□□□□ 0.38
NEK3P51956 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NEK3P51956 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 AC008741.2-201ENST00000612792 3115 ntBASIC17.43■□□□□ 0.38
NEK3P51956 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
NEK3P51956 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.43■□□□□ 0.38
NEK3P51956 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.43■□□□□ 0.38
NEK3P51956 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 AC108751.1-201ENST00000490852 363 ntBASIC17.43■□□□□ 0.38
NEK3P51956 AC140113.2-201ENST00000604370 208 ntBASIC17.43■□□□□ 0.38
NEK3P51956 AL353135.1-201ENST00000606729 504 ntBASIC17.43■□□□□ 0.38
NEK3P51956 FAM197Y3-203ENST00000618346 717 ntBASIC17.43■□□□□ 0.38
NEK3P51956 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NEK3P51956 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 AC093525.9-201ENST00000624961 1746 ntBASIC17.43■□□□□ 0.38
NEK3P51956 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
NEK3P51956 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEK3P51956 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NEK3P51956 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 PMS2P7-201ENST00000506558 1336 ntBASIC17.43■□□□□ 0.38
NEK3P51956 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
NEK3P51956 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
NEK3P51956 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NEK3P51956 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NEK3P51956 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEK3P51956 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.42■□□□□ 0.38
NEK3P51956 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NEK3P51956 ACTG1P4-201ENST00000425123 1122 ntBASIC17.42■□□□□ 0.38
NEK3P51956 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 RPS15P9-201ENST00000494093 319 ntBASIC17.42■□□□□ 0.38
NEK3P51956 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEK3P51956 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.42■□□□□ 0.38
NEK3P51956 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.42■□□□□ 0.38
NEK3P51956 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.42■□□□□ 0.38
NEK3P51956 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 GPR89P-201ENST00000407924 1495 ntBASIC17.42■□□□□ 0.38
NEK3P51956 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NEK3P51956 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEK3P51956 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.41■□□□□ 0.38
NEK3P51956 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NEK3P51956 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NEK3P51956 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NEK3P51956 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.41■□□□□ 0.38
NEK3P51956 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.41■□□□□ 0.38
NEK3P51956 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.41■□□□□ 0.38
NEK3P51956 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 AL805961.1-202ENST00000641562 540 ntBASIC17.41■□□□□ 0.38
NEK3P51956 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NEK3P51956 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEK3P51956 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms