Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC080080.1-201ENST00000625121 2420 ntBASIC16.84■□□□□ 0.29
CSNK1DP48730 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 MIR1233-2-201ENST00000408138 82 ntBASIC16.84■□□□□ 0.29
CSNK1DP48730 MIR1233-1-201ENST00000408722 82 ntBASIC16.84■□□□□ 0.29
CSNK1DP48730 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 CEND1P1-201ENST00000451006 455 ntBASIC16.84■□□□□ 0.29
CSNK1DP48730 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
CSNK1DP48730 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1DP48730 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1DP48730 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1DP48730 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1DP48730 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1DP48730 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1DP48730 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1DP48730 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1DP48730 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1DP48730 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1DP48730 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.83■□□□□ 0.28
CSNK1DP48730 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1DP48730 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.83■□□□□ 0.28
CSNK1DP48730 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1DP48730 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.83■□□□□ 0.28
CSNK1DP48730 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSNK1DP48730 AC055717.3-201ENST00000622967 595 ntBASIC16.83■□□□□ 0.28
CSNK1DP48730 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CSNK1DP48730 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1DP48730 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.83■□□□□ 0.28
CSNK1DP48730 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.83■□□□□ 0.28
CSNK1DP48730 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CSNK1DP48730 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 AC211486.1-202ENST00000416371 468 ntBASIC16.82■□□□□ 0.28
CSNK1DP48730 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 AP006288.1-201ENST00000446065 395 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms