Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.8■□□□□ 0.76
NEDD4P46934 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.8■□□□□ 0.76
NEDD4P46934 AC140658.5-201ENST00000438532 169 ntBASIC19.8■□□□□ 0.76
NEDD4P46934 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.8■□□□□ 0.76
NEDD4P46934 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.8■□□□□ 0.76
NEDD4P46934 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.8■□□□□ 0.76
NEDD4P46934 AP002490.2-201ENST00000524791 560 ntBASIC19.8■□□□□ 0.76
NEDD4P46934 AC092865.5-201ENST00000545435 363 ntBASIC19.8■□□□□ 0.76
NEDD4P46934 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 AL031055.1-201ENST00000606362 631 ntBASIC19.8■□□□□ 0.76
NEDD4P46934 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.8■□□□□ 0.76
NEDD4P46934 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 HLA-A-202ENST00000376806 1854 ntBASIC19.8■□□□□ 0.76
NEDD4P46934 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NEDD4P46934 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NEDD4P46934 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.8■□□□□ 0.76
NEDD4P46934 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NEDD4P46934 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NEDD4P46934 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.8■□□□□ 0.76
NEDD4P46934 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.8■□□□□ 0.76
NEDD4P46934 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.8■□□□□ 0.76
NEDD4P46934 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NEDD4P46934 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
NEDD4P46934 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NEDD4P46934 GPX1P2-201ENST00000429271 606 ntBASIC19.79■□□□□ 0.76
NEDD4P46934 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.79■□□□□ 0.76
NEDD4P46934 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NEDD4P46934 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.79■□□□□ 0.76
NEDD4P46934 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.79■□□□□ 0.76
NEDD4P46934 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.79■□□□□ 0.76
NEDD4P46934 AC099522.2-201ENST00000607001 744 ntBASIC19.79■□□□□ 0.76
NEDD4P46934 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.79■□□□□ 0.76
NEDD4P46934 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.79■□□□□ 0.76
NEDD4P46934 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NEDD4P46934 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NEDD4P46934 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NEDD4P46934 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NEDD4P46934 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.78■□□□□ 0.76
NEDD4P46934 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.78■□□□□ 0.76
NEDD4P46934 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.78■□□□□ 0.76
NEDD4P46934 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.78■□□□□ 0.76
NEDD4P46934 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 AL118508.1-201ENST00000613502 2345 ntBASIC19.78■□□□□ 0.76
NEDD4P46934 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NEDD4P46934 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NEDD4P46934 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NEDD4P46934 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NEDD4P46934 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
NEDD4P46934 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NEDD4P46934 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms