Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 REXO1L6P-202ENST00000619970 1078 ntBASIC17.66■□□□□ 0.42
SLC1A1P43005 REXO1L3P-201ENST00000622202 1288 ntBASIC17.66■□□□□ 0.42
SLC1A1P43005 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A1P43005 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A1P43005 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A1P43005 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A1P43005 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 AL662844.4-201ENST00000606367 2838 ntBASIC17.66■□□□□ 0.42
SLC1A1P43005 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A1P43005 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A1P43005 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A1P43005 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A1P43005 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A1P43005 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC1A1P43005 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC1A1P43005 PTCHD3P3-201ENST00000403073 906 ntBASIC17.65■□□□□ 0.42
SLC1A1P43005 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC1A1P43005 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A1P43005 AC091167.2-201ENST00000579581 588 ntBASIC17.65■□□□□ 0.42
SLC1A1P43005 MIR4492-201ENST00000581627 80 ntBASIC17.65■□□□□ 0.42
SLC1A1P43005 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC1A1P43005 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SLC1A1P43005 SNX33P1-201ENST00000592116 1762 ntBASIC17.65■□□□□ 0.42
SLC1A1P43005 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A1P43005 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 MTHFR-217ENST00000641820 1569 ntBASIC17.65■□□□□ 0.42
SLC1A1P43005 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A1P43005 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A1P43005 AC002310.6-201ENST00000624451 1377 ntBASIC17.65■□□□□ 0.42
SLC1A1P43005 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC1A1P43005 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC1A1P43005 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC1A1P43005 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC1A1P43005 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A1P43005 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A1P43005 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC1A1P43005 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC1A1P43005 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A1P43005 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC1A1P43005 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.64■□□□□ 0.41
SLC1A1P43005 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC1A1P43005 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC1A1P43005 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 GGT3P-204ENST00000453783 1664 ntBASIC17.64■□□□□ 0.41
SLC1A1P43005 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A1P43005 PI4KAP1-204ENST00000612579 1703 ntBASIC17.64■□□□□ 0.41
SLC1A1P43005 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 KRT8P39-201ENST00000396270 1433 ntBASIC17.64■□□□□ 0.41
SLC1A1P43005 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A1P43005 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 PCDH8P1-201ENST00000428983 2773 ntBASIC17.63■□□□□ 0.41
SLC1A1P43005 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC1A1P43005 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SLC1A1P43005 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC1A1P43005 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC1A1P43005 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms