Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CEACAM3P40198 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.8□□□□□ -0.2
CEACAM3P40198 AC068418.2-201ENST00000577309 3703 ntBASIC13.8□□□□□ -0.2
CEACAM3P40198 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CEACAM3P40198 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CEACAM3P40198 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CEACAM3P40198 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CEACAM3P40198 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CEACAM3P40198 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CEACAM3P40198 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CEACAM3P40198 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CEACAM3P40198 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
CEACAM3P40198 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.79□□□□□ -0.2
CEACAM3P40198 CRYGEP-201ENST00000412192 528 ntBASIC13.79□□□□□ -0.2
CEACAM3P40198 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.79□□□□□ -0.2
CEACAM3P40198 AC108073.2-201ENST00000464002 357 ntBASIC13.79□□□□□ -0.2
CEACAM3P40198 IGHV3-22-201ENST00000520721 359 ntBASIC13.79□□□□□ -0.2
CEACAM3P40198 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.79□□□□□ -0.2
CEACAM3P40198 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.79□□□□□ -0.2
CEACAM3P40198 Z83851.2-201ENST00000609564 659 ntBASIC13.79□□□□□ -0.2
CEACAM3P40198 BX640515.1-201ENST00000617215 977 ntBASIC13.79□□□□□ -0.2
CEACAM3P40198 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CEACAM3P40198 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CEACAM3P40198 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CEACAM3P40198 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 AL121761.2-201ENST00000598007 1648 ntBASIC13.79□□□□□ -0.2
CEACAM3P40198 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CEACAM3P40198 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CEACAM3P40198 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CEACAM3P40198 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
CEACAM3P40198 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.78□□□□□ -0.2
CEACAM3P40198 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.78□□□□□ -0.2
CEACAM3P40198 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CEACAM3P40198 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CEACAM3P40198 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.78□□□□□ -0.2
CEACAM3P40198 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.78□□□□□ -0.2
CEACAM3P40198 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.78□□□□□ -0.2
CEACAM3P40198 RNA5SP415-201ENST00000517246 115 ntBASIC13.78□□□□□ -0.2
CEACAM3P40198 UNC93B6-202ENST00000528242 690 ntBASIC13.78□□□□□ -0.2
CEACAM3P40198 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.78□□□□□ -0.2
CEACAM3P40198 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.78□□□□□ -0.2
CEACAM3P40198 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.78□□□□□ -0.2
CEACAM3P40198 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.78□□□□□ -0.2
CEACAM3P40198 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms