Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KRT8P39-201ENST00000396270 1433 ntBASIC16.77■□□□□ 0.27
HMGCLP35914 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCLP35914 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCLP35914 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.77■□□□□ 0.27
HMGCLP35914 AC006538.1-201ENST00000567905 1585 ntBASIC16.77■□□□□ 0.27
HMGCLP35914 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HMGCLP35914 AL671710.1-201ENST00000610245 2349 ntBASIC16.76■□□□□ 0.27
HMGCLP35914 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HMGCLP35914 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGCLP35914 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCLP35914 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HMGCLP35914 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HMGCLP35914 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMGCLP35914 HMGA1P7-201ENST00000406908 502 ntBASIC16.76■□□□□ 0.27
HMGCLP35914 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCLP35914 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGCLP35914 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.76■□□□□ 0.27
HMGCLP35914 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.76■□□□□ 0.27
HMGCLP35914 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCLP35914 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCLP35914 HLA-A-202ENST00000376806 1854 ntBASIC16.76■□□□□ 0.27
HMGCLP35914 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCLP35914 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCLP35914 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HMGCLP35914 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 BCAR1-209ENST00000546196 1340 ntBASIC16.75■□□□□ 0.27
HMGCLP35914 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.75■□□□□ 0.27
HMGCLP35914 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCLP35914 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCLP35914 AP000347.1-202ENST00000435868 847 ntBASIC16.75■□□□□ 0.27
HMGCLP35914 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.75■□□□□ 0.27
HMGCLP35914 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 KRT19P2-202ENST00000557173 1012 ntBASIC16.75■□□□□ 0.27
HMGCLP35914 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.75■□□□□ 0.27
HMGCLP35914 AL671883.3-201ENST00000603274 991 ntBASIC16.75■□□□□ 0.27
HMGCLP35914 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.75■□□□□ 0.27
HMGCLP35914 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCLP35914 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 AC025580.3-201ENST00000617932 1424 ntBASIC16.75■□□□□ 0.27
HMGCLP35914 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGCLP35914 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.75■□□□□ 0.27
HMGCLP35914 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCLP35914 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGCLP35914 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
HMGCLP35914 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGCLP35914 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HMGCLP35914 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGCLP35914 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.74■□□□□ 0.27
HMGCLP35914 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.74■□□□□ 0.27
HMGCLP35914 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGCLP35914 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms