Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSP1P33241 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.97■□□□□ 0.31
LSP1P33241 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSP1P33241 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LSP1P33241 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.97■□□□□ 0.31
LSP1P33241 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.96■□□□□ 0.31
LSP1P33241 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.96■□□□□ 0.31
LSP1P33241 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LSP1P33241 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LSP1P33241 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.96■□□□□ 0.31
LSP1P33241 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.96■□□□□ 0.31
LSP1P33241 TSPY12P-201ENST00000421279 868 ntBASIC16.96■□□□□ 0.31
LSP1P33241 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LSP1P33241 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.96■□□□□ 0.31
LSP1P33241 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.96■□□□□ 0.31
LSP1P33241 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LSP1P33241 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.96■□□□□ 0.31
LSP1P33241 AC024563.2-201ENST00000603282 481 ntBASIC16.96■□□□□ 0.31
LSP1P33241 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LSP1P33241 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LSP1P33241 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.96■□□□□ 0.31
LSP1P33241 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSP1P33241 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.96■□□□□ 0.3
LSP1P33241 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LSP1P33241 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LSP1P33241 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.96■□□□□ 0.3
LSP1P33241 LINC00895-201ENST00000629028 1637 ntBASIC16.96■□□□□ 0.3
LSP1P33241 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LSP1P33241 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LSP1P33241 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.96■□□□□ 0.3
LSP1P33241 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LSP1P33241 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LSP1P33241 AC023908.3-201ENST00000564211 3047 ntBASIC16.95■□□□□ 0.3
LSP1P33241 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LSP1P33241 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.95■□□□□ 0.3
LSP1P33241 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 AP005242.2-201ENST00000580065 1175 ntBASIC16.95■□□□□ 0.3
LSP1P33241 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.95■□□□□ 0.3
LSP1P33241 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.95■□□□□ 0.3
LSP1P33241 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.95■□□□□ 0.3
LSP1P33241 AL157888.1-201ENST00000631930 593 ntBASIC16.95■□□□□ 0.3
LSP1P33241 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.95■□□□□ 0.3
LSP1P33241 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.95■□□□□ 0.3
LSP1P33241 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LSP1P33241 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.94■□□□□ 0.3
LSP1P33241 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.94■□□□□ 0.3
LSP1P33241 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.94■□□□□ 0.3
LSP1P33241 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LSP1P33241 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LSP1P33241 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.94■□□□□ 0.3
LSP1P33241 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.94■□□□□ 0.3
LSP1P33241 AC112504.1-201ENST00000623415 1841 ntBASIC16.94■□□□□ 0.3
LSP1P33241 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.94■□□□□ 0.3
LSP1P33241 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LSP1P33241 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LSP1P33241 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
LSP1P33241 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LSP1P33241 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.94■□□□□ 0.3
LSP1P33241 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms