Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TM4SF1P30408 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TM4SF1P30408 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF1P30408 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TM4SF1P30408 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TM4SF1P30408 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.69■□□□□ 0.9
TM4SF1P30408 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TM4SF1P30408 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.69■□□□□ 0.9
TM4SF1P30408 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.69■□□□□ 0.9
TM4SF1P30408 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 AL512343.1-201ENST00000605837 169 ntBASIC20.69■□□□□ 0.9
TM4SF1P30408 AL606495.2-201ENST00000605867 535 ntBASIC20.69■□□□□ 0.9
TM4SF1P30408 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.69■□□□□ 0.9
TM4SF1P30408 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TM4SF1P30408 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.69■□□□□ 0.9
TM4SF1P30408 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.69■□□□□ 0.9
TM4SF1P30408 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF1P30408 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.68■□□□□ 0.9
TM4SF1P30408 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TM4SF1P30408 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 AL138688.1-201ENST00000624851 1594 ntBASIC20.68■□□□□ 0.9
TM4SF1P30408 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.68■□□□□ 0.9
TM4SF1P30408 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TM4SF1P30408 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TM4SF1P30408 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.68■□□□□ 0.9
TM4SF1P30408 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.68■□□□□ 0.9
TM4SF1P30408 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.68■□□□□ 0.9
TM4SF1P30408 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
TM4SF1P30408 CTBP2P3-201ENST00000585629 1255 ntBASIC20.68■□□□□ 0.9
TM4SF1P30408 AC013467.2-201ENST00000605472 835 ntBASIC20.68■□□□□ 0.9
TM4SF1P30408 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF1P30408 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TM4SF1P30408 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF1P30408 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.67■□□□□ 0.9
TM4SF1P30408 SNX33P1-201ENST00000592116 1762 ntBASIC20.67■□□□□ 0.9
TM4SF1P30408 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF1P30408 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.67■□□□□ 0.9
TM4SF1P30408 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 SPDYE17-201ENST00000412399 783 ntBASIC20.67■□□□□ 0.9
TM4SF1P30408 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.67■□□□□ 0.9
TM4SF1P30408 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 AC055876.2-201ENST00000531834 546 ntBASIC20.67■□□□□ 0.9
TM4SF1P30408 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.67■□□□□ 0.9
TM4SF1P30408 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF1P30408 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TM4SF1P30408 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TM4SF1P30408 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.67■□□□□ 0.9
TM4SF1P30408 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF1P30408 KRT8P12-202ENST00000472924 1397 ntBASIC20.67■□□□□ 0.9
TM4SF1P30408 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TM4SF1P30408 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM4SF1P30408 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.67■□□□□ 0.9
TM4SF1P30408 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms