Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNA3P22001 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KCNA3P22001 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNA3P22001 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNA3P22001 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNA3P22001 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KCNA3P22001 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KCNA3P22001 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KCNA3P22001 SPDYE17-201ENST00000412399 783 ntBASIC20.4■□□□□ 0.86
KCNA3P22001 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNA3P22001 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KCNA3P22001 FRMD8P1-201ENST00000440433 1524 ntBASIC20.4■□□□□ 0.86
KCNA3P22001 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNA3P22001 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA3P22001 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA3P22001 SDHAP3-202ENST00000515467 728 ntBASIC20.4■□□□□ 0.86
KCNA3P22001 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA3P22001 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNA3P22001 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA3P22001 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.4■□□□□ 0.86
KCNA3P22001 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.4■□□□□ 0.86
KCNA3P22001 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
KCNA3P22001 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.4■□□□□ 0.86
KCNA3P22001 MIR8072-201ENST00000614241 80 ntBASIC20.4■□□□□ 0.86
KCNA3P22001 AC093525.8-201ENST00000624099 1342 ntBASIC20.4■□□□□ 0.86
KCNA3P22001 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.39■□□□□ 0.86
KCNA3P22001 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
KCNA3P22001 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
KCNA3P22001 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
KCNA3P22001 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KCNA3P22001 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.39■□□□□ 0.86
KCNA3P22001 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.39■□□□□ 0.86
KCNA3P22001 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.39■□□□□ 0.86
KCNA3P22001 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KCNA3P22001 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNA3P22001 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNA3P22001 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA3P22001 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNA3P22001 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KCNA3P22001 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.39■□□□□ 0.85
KCNA3P22001 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNA3P22001 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.39■□□□□ 0.85
KCNA3P22001 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.39■□□□□ 0.85
KCNA3P22001 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
KCNA3P22001 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.39■□□□□ 0.85
KCNA3P22001 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KCNA3P22001 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA3P22001 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 BOLA2P3-201ENST00000404566 256 ntBASIC20.38■□□□□ 0.85
KCNA3P22001 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNA3P22001 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNA3P22001 USP32P1-208ENST00000506594 1164 ntBASIC20.38■□□□□ 0.85
KCNA3P22001 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNA3P22001 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.38■□□□□ 0.85
KCNA3P22001 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.38■□□□□ 0.85
KCNA3P22001 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA3P22001 BTNL10-201ENST00000595971 695 ntBASIC20.38■□□□□ 0.85
KCNA3P22001 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA3P22001 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNA3P22001 AL033527.5-201ENST00000641382 801 ntBASIC20.38■□□□□ 0.85
KCNA3P22001 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
KCNA3P22001 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 CDC14C-201ENST00000428251 1719 ntBASIC20.38■□□□□ 0.85
KCNA3P22001 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA3P22001 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNA3P22001 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNA3P22001 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms