Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 FSCN1P1-201ENST00000568912 1481 ntBASIC14.18□□□□□ -0.14
CXCL3P19876 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 SSR4P1-203ENST00000599569 2260 ntBASIC14.18□□□□□ -0.14
CXCL3P19876 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 GGT4P-201ENST00000623672 1708 ntBASIC14.18□□□□□ -0.14
CXCL3P19876 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 AC113404.2-201ENST00000507884 177 ntBASIC14.18□□□□□ -0.14
CXCL3P19876 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL3P19876 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL3P19876 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL3P19876 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.18□□□□□ -0.14
CXCL3P19876 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.18□□□□□ -0.14
CXCL3P19876 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.18□□□□□ -0.14
CXCL3P19876 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CXCL3P19876 AC112504.1-201ENST00000623415 1841 ntBASIC14.18□□□□□ -0.14
CXCL3P19876 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CXCL3P19876 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 AC006449.6-201ENST00000612330 2296 ntBASIC14.17□□□□□ -0.14
CXCL3P19876 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL3P19876 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CXCL3P19876 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL3P19876 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.17□□□□□ -0.14
CXCL3P19876 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL3P19876 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.17□□□□□ -0.14
CXCL3P19876 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 HLA-J-202ENST00000469281 1241 ntBASIC14.17□□□□□ -0.14
CXCL3P19876 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 AC063926.3-201ENST00000624734 5658 ntBASIC14.17□□□□□ -0.14
CXCL3P19876 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.17□□□□□ -0.14
CXCL3P19876 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CXCL3P19876 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms