Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.11■□□□□ 0.49
CD58P19256 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CD58P19256 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CD58P19256 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.11■□□□□ 0.49
CD58P19256 PRSS29P-201ENST00000440800 595 ntBASIC18.11■□□□□ 0.49
CD58P19256 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.11■□□□□ 0.49
CD58P19256 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.11■□□□□ 0.49
CD58P19256 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.11■□□□□ 0.49
CD58P19256 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.11■□□□□ 0.49
CD58P19256 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.11■□□□□ 0.49
CD58P19256 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.11■□□□□ 0.49
CD58P19256 TOP3BP1-201ENST00000420768 1380 ntBASIC18.11■□□□□ 0.49
CD58P19256 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.11■□□□□ 0.49
CD58P19256 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CD58P19256 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.11■□□□□ 0.49
CD58P19256 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD58P19256 AC079328.2-201ENST00000561241 3354 ntBASIC18.11■□□□□ 0.49
CD58P19256 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.11■□□□□ 0.49
CD58P19256 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD58P19256 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.1■□□□□ 0.49
CD58P19256 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 AC124067.4-201ENST00000519691 2379 ntBASIC18.1■□□□□ 0.49
CD58P19256 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.1■□□□□ 0.49
CD58P19256 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CD58P19256 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 AGGF1P2-201ENST00000426656 2106 ntBASIC18.1■□□□□ 0.49
CD58P19256 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CD58P19256 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.1■□□□□ 0.49
CD58P19256 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.1■□□□□ 0.49
CD58P19256 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.1■□□□□ 0.49
CD58P19256 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.1■□□□□ 0.49
CD58P19256 MIR940-201ENST00000401276 94 ntBASIC18.1■□□□□ 0.49
CD58P19256 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 IGLL3P-201ENST00000412472 434 ntBASIC18.1■□□□□ 0.49
CD58P19256 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.1■□□□□ 0.49
CD58P19256 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.1■□□□□ 0.49
CD58P19256 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.1■□□□□ 0.49
CD58P19256 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.1■□□□□ 0.49
CD58P19256 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.1■□□□□ 0.49
CD58P19256 AC106730.1-201ENST00000566722 1090 ntBASIC18.1■□□□□ 0.49
CD58P19256 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.1■□□□□ 0.49
CD58P19256 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.1■□□□□ 0.49
CD58P19256 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD58P19256 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.09■□□□□ 0.49
CD58P19256 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.09■□□□□ 0.49
CD58P19256 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.09■□□□□ 0.49
CD58P19256 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
CD58P19256 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CD58P19256 AC129492.6-201ENST00000611383 1305 ntBASIC18.09■□□□□ 0.49
CD58P19256 AL645728.1-201ENST00000366221 2101 ntBASIC18.09■□□□□ 0.49
CD58P19256 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.09■□□□□ 0.49
CD58P19256 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.09■□□□□ 0.49
CD58P19256 AP000347.1-202ENST00000435868 847 ntBASIC18.09■□□□□ 0.49
CD58P19256 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.09■□□□□ 0.49
CD58P19256 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CD58P19256 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CD58P19256 AC064836.3-201ENST00000607928 673 ntBASIC18.09■□□□□ 0.49
CD58P19256 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.09■□□□□ 0.49
CD58P19256 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.09■□□□□ 0.49
CD58P19256 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.09■□□□□ 0.49
CD58P19256 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD58P19256 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.08■□□□□ 0.49
CD58P19256 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD58P19256 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms