Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.87■□□□□ 0.29
XRCC1P18887 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC1P18887 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.87■□□□□ 0.29
XRCC1P18887 ELK2BP-201ENST00000415014 1224 ntBASIC16.87■□□□□ 0.29
XRCC1P18887 AL591424.1-201ENST00000442569 1213 ntBASIC16.87■□□□□ 0.29
XRCC1P18887 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.87■□□□□ 0.29
XRCC1P18887 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC1P18887 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC1P18887 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.87■□□□□ 0.29
XRCC1P18887 AC027601.4-201ENST00000611259 610 ntBASIC16.87■□□□□ 0.29
XRCC1P18887 FAM197Y3-203ENST00000618346 717 ntBASIC16.87■□□□□ 0.29
XRCC1P18887 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.87■□□□□ 0.29
XRCC1P18887 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
XRCC1P18887 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC1P18887 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.86■□□□□ 0.29
XRCC1P18887 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
XRCC1P18887 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC1P18887 AL135999.2-201ENST00000622438 1686 ntBASIC16.86■□□□□ 0.29
XRCC1P18887 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.86■□□□□ 0.29
XRCC1P18887 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.86■□□□□ 0.29
XRCC1P18887 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.86■□□□□ 0.29
XRCC1P18887 TERC-201ENST00000602385 541 ntBASIC16.86■□□□□ 0.29
XRCC1P18887 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC1P18887 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.86■□□□□ 0.29
XRCC1P18887 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 AC079328.2-201ENST00000561241 3354 ntBASIC16.86■□□□□ 0.29
XRCC1P18887 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
XRCC1P18887 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XRCC1P18887 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.85■□□□□ 0.29
XRCC1P18887 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 RPS15P9-201ENST00000494093 319 ntBASIC16.85■□□□□ 0.29
XRCC1P18887 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.85■□□□□ 0.29
XRCC1P18887 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 AC008667.4-201ENST00000607370 168 ntBASIC16.85■□□□□ 0.29
XRCC1P18887 AL805961.1-202ENST00000641562 540 ntBASIC16.85■□□□□ 0.29
XRCC1P18887 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XRCC1P18887 PMS2P7-201ENST00000506558 1336 ntBASIC16.85■□□□□ 0.29
XRCC1P18887 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
XRCC1P18887 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms