Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCLP18206 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VCLP18206 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VCLP18206 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VCLP18206 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.02■□□□□ 0.32
VCLP18206 AL590627.1-203ENST00000421194 1026 ntBASIC17.02■□□□□ 0.32
VCLP18206 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCLP18206 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.02■□□□□ 0.32
VCLP18206 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 AL139424.1-201ENST00000607572 797 ntBASIC17.02■□□□□ 0.32
VCLP18206 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.02■□□□□ 0.32
VCLP18206 BX640515.1-201ENST00000617215 977 ntBASIC17.02■□□□□ 0.32
VCLP18206 AC004706.3-202ENST00000621574 984 ntBASIC17.02■□□□□ 0.32
VCLP18206 AC005593.1-201ENST00000624894 515 ntBASIC17.02■□□□□ 0.32
VCLP18206 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VCLP18206 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
VCLP18206 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.02■□□□□ 0.32
VCLP18206 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
VCLP18206 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
VCLP18206 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.02■□□□□ 0.31
VCLP18206 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.02■□□□□ 0.31
VCLP18206 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
VCLP18206 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCLP18206 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.01■□□□□ 0.31
VCLP18206 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VCLP18206 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.01■□□□□ 0.31
VCLP18206 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VCLP18206 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.01■□□□□ 0.31
VCLP18206 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 LINC00982-205ENST00000420957 435 ntBASIC17.01■□□□□ 0.31
VCLP18206 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.01■□□□□ 0.31
VCLP18206 AC092910.1-201ENST00000482027 1129 ntBASIC17.01■□□□□ 0.31
VCLP18206 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.01■□□□□ 0.31
VCLP18206 AC136632.2-201ENST00000512891 861 ntBASIC17.01■□□□□ 0.31
VCLP18206 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.01■□□□□ 0.31
VCLP18206 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
VCLP18206 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 AC120114.3-201ENST00000611923 658 ntBASIC17.01■□□□□ 0.31
VCLP18206 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.01■□□□□ 0.31
VCLP18206 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.01■□□□□ 0.31
VCLP18206 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VCLP18206 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
VCLP18206 AC093525.9-201ENST00000624961 1746 ntBASIC17.01■□□□□ 0.31
VCLP18206 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VCLP18206 NFIC-211ENST00000641145 8399 ntBASIC17.01■□□□□ 0.31
VCLP18206 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.01■□□□□ 0.31
VCLP18206 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCLP18206 AL135999.2-201ENST00000622438 1686 ntBASIC17.01■□□□□ 0.31
VCLP18206 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VCLP18206 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCLP18206 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCLP18206 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
VCLP18206 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms